fix(impermanence): move persist dirs to home-manager module so permissions work right

modules/programs/scripts/deploy.sh

@@ -1,43 +1,44 @@
 # Set default values
-flake=".#default" # Default flake attribute if none is provided
+flake=".#default"              # Default flake attribute if none is provided
 target_host="nixos@<hostname>" # Default target host
 
 # Process command-line arguments
 while [[ $# -gt 0 ]]; do
   case "$1" in
-    --flake)
-      flake="$2"
-      shift # past argument
-      shift # past value
-      ;;
-    --target-host)
-      target_host="$2"
-      shift # past argument
-      shift # past value
-      ;;
-    *)
-      echo "Unknown option: $1" >&2
-      exit 1
-      ;;
+  --flake)
+    flake="$2"
+    shift # past argument
+    shift # past value
+    ;;
+  --target-host)
+    target_host="$2"
+    shift # past argument
+    shift # past value
+    ;;
+  *)
+    echo "Unknown option: $1" >&2
+    exit 1
+    ;;
   esac
 done
 
 # Prepare temporary directory and copy necessary files
 root=$(mktemp -d)
-mkdir -p ${root}/persist
-root=${root}/persist
-sudo cp --verbose --archive --parents /etc/ssh/ssh_host_* ${root}
-sudo cp --verbose --archive --parents ~/.ssh/id_ed25519 ${root}
-sudo cp --verbose --archive --parents ~/.config/sops/age/keys.txt ${root}
+# Files should be copied to the persist directory
+# because that's where impermanence looks for them in.
+mkdir -p "${root}"/persist
+root_persist=${root}/persist
+sudo cp --verbose --archive --parents /etc/ssh/ssh_host_* "${root_persist}"
+sudo cp --verbose --archive --parents /home/rafiq/.ssh/id_ed25519 "${root_persist}"
+sudo cp --verbose --archive --parents /home/rafiq/.config/sops/age/keys.txt "${root_persist}"
 
 # Run nixos-anywhere
+# Copy over the necesary files to the persist directory.
 sudo nix run github:nix-community/nixos-anywhere -- \
   --flake "${flake}" \
   --target-host "${target_host}" \
-  --copy-host-keys \
   --extra-files "${root}" \
-  --chown /home/rafiq/.config 1000:100 \
-  --chown /home/rafiq/.ssh 1000:100
+  --chown /persist/home/rafiq 1000:100
 
 # Clean up the temporary directory
 sudo rm -rf "$root"